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software:2017shwav [2017/09/14 17:43]
ljhwang [2017 CIG-LLNL Computational Seismology Workshop]
software:2017shwav [2017/09/19 17:09] (current)
ljhwang
Line 1: Line 1:
 ===== 2017 CIG-LLNL Computational Seismology Workshop ===== ===== 2017 CIG-LLNL Computational Seismology Workshop =====
  
-[[software:​2017shwav:​Restaurants|Local ​Restaurant]]+[[software:​2017shwav:​Restaurants|Local ​Restaurants]] 
 + 
 +---- 
  
 ==== ObsPy and InstaSeis Tutorial ==== ==== ObsPy and InstaSeis Tutorial ====
  
-insert link to github+Instructions for this tutorial are on github:  [[https://​github.com/​krischer/​cig_llnl_computational_seismology_workshop_obspy_instaseis|Link]]
  
 ==== SPECFEM Tutorial ==== ==== SPECFEM Tutorial ====
- +Instructions for this tutorial are on github: [[https://​uvaaland.github.io/​cig_llnl_workshop/​prepare_data.html|Link]]
-insert link to github+
  
 ==== SW4 Tutorial ==== ==== SW4 Tutorial ====
 +
 +==== IRIS Data Brick ====
 +
 +Using the IRIS Data Brick at the workshop.
 +
 +Many of the common FDSN web service clients allow setting the specific service locations. ​ For this workshop the service is at:
 +
 +http://​10.200.65.174:​8080/​fdsnws/​dataselect/​1 ​ (IP likely changing each day, updates will be posted)
 +or
 +http://​iris-dbserver.local:​8080/​fdsnws/​dataselect/​1 (.local not consistently working)
 +
 +__
 +What is on the data brick__? ​ Use the ‘summary’ endpoint:
 +
 +http://​10.200.65.174:​8080/​fdsnws/​dataselect/​1/​summary
 +
 +__Using with ObsPy__
 +
 +   from obspy.clients.fdsn import Client
 +   ​client = Client("​IRIS",​ service_mappings={
 +        '​dataselect':​ '​http://​10.200.65.174:​8080/​fdsnws/​dataselect/​1'​})
 +
 +__Using with FetchData__
 +
 +  $ FetchData -timeseriesws http://​10.200.65.174:​8080/​fdsnws/​dataselect/​1 ​
 +         <​data selection options here>
 +
 +----
 +
  
 ==== LVOC ==== ==== LVOC ====
-add the good things ​to know here"+Orientation [[https://​computing.llnl.gov/​tutorials/​2017.09.18.CIG-LC_Orientation.pdf|pdf]] 
 +=== Wifi === 
 + 
 +Network: LVOC Guest. 
 + 
 +Logins are assigned. 
 + 
 +=== Login === 
 + 
 +    ssh -X -l class22 quartz.llnl.gov 
 +    ssh -Y -l class22 quartz.llnl.gov 
 +password is enter your 8 character static PIN plus the six digits on the RSA token with no spaces. 
 +  
 +=== Directories === 
 + 
 +Home directory: ''/​g/​g13/​{username}''​  
 + 
 +for example: ''/​g/​g13/​class22''​ 
 + 
 +Scratch space directory: ''/​p/​lscratchh/​{username}''​  
 + 
 +Global read only directories:​ 
 +    /​usr/​apps/​cigdata 
 +    /​usr/​apps/​specfem 
 +    /​usr/​apps/​sw4 
 + 
 +=== Useful Commands === 
 +Change directory ​to scratch space directory:​ 
 + 
 +     cd /​p/​lscratchh/​{username} 
 + 
 +We will run on the pReserved partion. Use the flag: 
 + 
 +''​ -p pReserved''​ 
 + 
 +     srun -N4 -p pReserved myjob 
 + 
 +     ​sbatch -p pReserved jobscript 
 +  
 +List all jobs: 
 +    squeue 
 +List jobs for //​username//:​  
 +    squeue -u username 
 +Show all details for a selected job: 
 +    checkjob jobid 
 +Show job partitions:​ 
 +    sinfo -s 
 +Cancel selected job(s): 
 +    scancel jobid(s) ​  
 + === Modules === 
 +To see what is available:​ 
 +    module avail 
 +To load a package: 
 +    module load packagename 
 +=== Text editors === 
 +  * vi/vim 
 +  * emacs 
 +  * nedit 
 +  * gedit 
 +  * nano
software/2017shwav.1505411012.txt.gz · Last modified: 2017/09/14 17:43 by ljhwang